Mommy I don't feel so good... | Daily struggles: CF & Immune compromise | Pharmacopoeia | *Cough* *Cough* | You got that WHERE? |
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What is pertussis?
A gram negative coccobacilli, encapsulated, that grows on Regan-Lowe (aka) charcoal blood agar.
This disease is associated with a catarrhal stage in which flu-like symptoms appear, and is a highly infectious period typically lasting 1-2 weeks.
[Bonus: Describe what this pathogen looks like and what type of media it grows on.] |
What is Pseudomonas aeruginosa?
B: Kleibsiella pneumoniae (will also accept E. Coli even though we haven't learned about it yet)
This gram-negative, aerobic bacteria is associated with a severe ventilator-acquired pneumonia and grows well at 42 C.
[Bonus: Name another gram negative rod that we learned about which is also associated with ventilators and hospital acquired pneumonias?] |
What is the inhibition of DNA gyrase (topo II) and topoisomerase IV?
Tendonitis and tendon rupture Contraindicated in pregnant and nursing women, not recommended if under 18 due to damage to cartilage. It also causes arrhythmia can cause TdP so be careful with administering to people with heart issues and avoid if possible.
Fluoroquinolones mechanism of action.
[Bonus: What black-box warning is there for fluoroquinolones and in whom is it contraindicated and not recommended?] |
What is cap-snatching during viral mRNA synthesis that takes place in the host cell nucleus?
B: TLRs (3,7,9 FYIO) expressed by innate cells recognize PAMPs. Intracellular TLRs recognize viral PAMPs, stimulates generation of TFs: NFkappaB - promotes inflammation and prepares for adaptive immune response; IRF3 - *** promotes the production of antiviral interferons and stimulates NK cells. Type I IFNs such as IFN alpha and beta are made by infected cells (any) and IFN gamma is made by NK cells, triggering the antiviral state. Type 1 IFNs bind to cells nearby to the infected cells and it causes them to release RNAses which degrades (most) viral RNA and prevents their replication/budding. IFN gamma activates NK cells which can directly kill virus-infected cells.
Function of PA and PB proteins of influenza virus and site of replication.
[Bonus: What triggers the antiviral state and what does it do to fight viral infection?] |
What is Streptococcus agalactiae?
B: It is a Group B Streptococcus (GBS).
This pathogen is the #1 cause of neonatal pneumonia and is often transmitted from an infected mother as the baby exits the vaginal canal.
[Bonus: Name its family or group.] |
What is epiglottitis?
B: Hib specific virulence factors: b capsule - protect bacteria from host defenses, increases infectivity PRP capsule- antiphagocytic, evades complement
What sign/symptom of Haemophilus influenzae b is a medical emergency if identified in children?
[Bonus: Name one virulence factor specific to Hib and what it does.] |
What is Burkholderia spp.? B. cepacia (Cepacia syndrome -> a pneumonia with poor prognosis for CF patients)
B. pseudomallei (Mellioidosis -> mild bronchitis to necrotizing pneumonia -> cavitary lesions -> sepsis -> death). B: Yes, it is lobar pneumonia, Dull to percussion
This facultative intracellular organism contributes to severe pneumonias, and a mild bronchitis that may become a necrotizing pneumonia in CF patients.
[Bonus: Would the pneumonia caused by this organism present with consolidation? What type of sound is heard on percussion?] |
Vancomycin, Tetracyclines, Macrolides, SMX-TMP, and 1-2nd gen cephalosporins.
[b: Kleibsiella pneumophila.]
What class(es) of drugs is NOT a choice for Pseudomonas aeruginosa? Choose all that apply.
Aminoglycosides; 1st-2nd gen cephalosporins 3-5th generation cephalosporins Macrolides Monobactams SMX-TMP Tetracyclines Vancomycin [Bonus: Pseudomonas and what other gram negative organism can be treated with Piperacillin,Tigeracillin, or carbapenems?] |
What is GERD?
B: Mycoplasma pneumoniae, Chlamydophila pneumoniae, Mycobacterium tuberculosis, Bordetella pertussis
Of the following, this is NOT an acute cause of cough.
Rhinosinusitis Bronchitis Heart failure GERD Pulmonary embolism [Bonus: Name the infectious or post-infectious bacteria causes of chronic cough - there are four?] |
What is antigenic drift?
B: (1) Because it is able to take some of its host's nucleotides during cap snatching it can introduce new sequences into its own genome and that allows it to mutate, changing its surface proteins HA and NA that are important for binding different sialic aid residues in the host (differ between hosts and location). (2) When a host is infected with more than one virus strain (for example avian and human strains), those strains can combine and undergo reassortment in the host harboring the two viruses allowing cross-over of the different strain into other species and creation of new, mutant viruses that have completely different properties of HA and NA proteins. This leads to worldwide epidemic and is more often seen in the A type of influenza.
Antigenic drift or antigenic shift? This is responsible for annual epidemics and the reason for updating the flu vaccine every year.
[Bonus: Why does influenza have high mutation rate (1) and the ability to cross genomes (animal to human and vice versa) - (2) ?] |
What is RSV - respiratory syncytial virus?
B: IL-6
Children at daycare centers in the United States have a high rate of infection of this respiratory negative-strand virus, especially in the winter.
[Bonus: Name the cytokine that is responsible for severe disease of this virus.] |
What is Legionella pneumophila?
B: Virulence factors OMP and DOT are two virulence factors that attract inflammatory immune cells (macrophages). OMP binds C3 in complement leading to opsonization and DOT which is secreted by T4SS prevents phagolysosomal fusion and modifies the phagosomal compartment into and LCV = legionella containing vesicle. Type 4 can also inject bacterial DNA.
This motile opportunistic pathogen causes an atypical pneumonia and secretes its virulence factors using a type 4 secretion system.
[Bonus: Name the virulence factors that are unique to its pathogenesis. What is the difference between type 3 and type 4 secretion systems?] |
What is blocking viral entry by binding the Fusion spike protein of RSV?
B: Passive artificial immunization given to high-risk infants and children. "High-risk" meaning Premies, babies with CHDs, or bronchopulmonary dysplasia.
Main effect of palivizumab and site of action?
[Bonus: Is this active or passive immunization, natural or artificial, and who is likely to receive it?] |
What is Lobar pneumonia?
IgA protease can destroy IgA at mucosa and evade Ig-mediated responses, Pneumococcal surface protein (pspA and B) prevent complement deposition and capsule polysaccharide is antiphagocytic.
While a majority of pneumonias are of viral etiology, the most common bacterial pneumonia infecting healthy individuals is Streptococcus pneumonia. It causes the following [image] presentation on X-Ray, termed what?
[Bonus: Name a virulence factor that is capable of escaping humoral immune responses and name two virulence factors that can evade complement/phagocytosis.] |
What is the elementary body?
B: Phagolysosome formation (fusion of phagosome with lysosome)
This form of an intracellular bacteria can survive harsh environmental conditions and is highly infectious.
[Bonus: When taken up by a host cell, what process does this form of bacteria prevent from happening within the host?] |
What is Chlamidophila pneumoniae?
B: Atypical, interstitial (patchy) pneumonia. Reticulate bodies.
This pathogen is associated with transmission in areas such as prisions and schools, same thing basically.
[Bonus: What type of pneumonia does it cause and name its metabolically active form.] |
What is IgA?
B: Selective IgA deficiency is typically asymptomatic, but patients have higher rate of recurrent respiratory infections than usual for their environment. They are a transfusion rejection risk and will have no detectable IgA. Common Variable Immunodeficiency is an uncommon IgA deficiency (as well as other Igs) that contributes to the hallmark trait of vaccine non-responders. They are highly susceptible to chronic lung diseases and have a reduced T-Cell proliferation.
This immunoglobulin exerts an antiviral effect by preventing virus from infecting the mucosal cells of the respiratory and gastrointestinal tracts.
[Bonus: Describe the effects of deficiency of this immunoglobulin in an individual and what clinical manifestations it might have (diseases, lab testing results, precautions)] |
What are the macrolides?
B: Azithromycin Contraindicated in infants < 1 m: Erythromycin can cause hypertrophic pyloric stenosis. Contraindicated in infants < 2 m: SMX-TMP can cause kernicterus (a bilirubin-induced brain dysfunction). Not recommended
This class of drug is first-line for the treatment of whooping cough.
[Bonus: Name the one that even babies are allowed to take and which ones are contraindicated for infants.] |
What is Antigen presented on Class I MHCs via the endogenous pathway expressed by all cells?
B: 1-Mutate --> Undergo antigenic shift, antigenic drift; 2- Downregulate host MHC expression in infected cells (This does not evade NK cell response though)
The adaptive immune response to viral infections is a delayed response mediated by cytotoxic T-cells that takes place in response to stimulation by this type of molecule/signal. [Specifically the killing response]
[Bonus: What can viruses do in cells to evade the adaptive immune response? What innate response can still occur to overcome this viral evasion mechanism?] |
What is the adenovirus?
B: dsDNA linear, vaccine Not for civilians, Strains 4&7 Chlamydia pneumoniae
This non-seasonal virus has had outbreaks in military barracks, daycare centers, and hospital wards and can cause either upper or lower respiratory tract symptoms.
[Bonus: What type of genetic material does this virus have and does vaccination exist for its strains? What other bug has had outbreaks in military quarters?] |
What are HN=hemaglutinin-neuraminidase and F=fusion spike proteins?
B: PIV-1 & 2 = fall PIV-3 = Spring/early summer
This highly contagious virus, whose hallmark symptom is croup, uses the following virulence mechanisms to gain entry into cells.
[Bonus: Name the seasons that this virus is commonly present.] |
What are the elastases (LasA and Las B)?
B: Alginate (an exopolysaccharide) secretion leads to biofilm formation, which further plugs up CF patient mucosa, and enhances bacterial attachment. **This is main virulence for CF patients; the main virulence factor in general is Exotoxin A (ETA)**
This/these type II secreted virulence factors cause lung parenchymal damage and hemorrhagic lesions in Pseudomonas infected individuals, and chronically infected patients will form antibodies to them.
[Bonus: Name the major virulence factor in patients with cystic fibrosis and its mechanism.] |
What is blocking the "cap-snatching mechanism" / endonuclease activity of PA protein in the RdRP / blocking viral replication?
B: Amantidine
Mechanism of action of baloxavir marboxil.
[Bonus: What antiviral drug has high rates of resistance and is no longer used for the treatment of the flu?] |
What is bronchopneumonia due to neutrophils infiltrating alveoli, bronchi, bronchioles?
B: Multilobar, patchy, bilateral/basal consolidations
In the following gross lung specimen [picture] this type of pathology has caused the following consolidations and is due to what pathological process?
[Bonus: Describe the typical location characteristics of this disease presentation] |
What are anaerobic bacteria? / What are anaerobic bacteria from the oral cavity?
B: Retropharyngeal abscess Boys under 5
A 35 year alcoholic male with a history of seizures is admitted with a three week history of fever, generalized weakness, poor appetite, and cough productive of green, foul - smelling sputum. On physical examination, the temperature is 100.3 degrees P. pulse is 96 beats per minute, respiratory rate is 20 breaths per minute, and BP is 120/80 mm. There are many missing teeth with gingivitis and dental caries. He has rales and decreased breath sounds over the right base. Chest x-ray [image] shows consolidation in the superior segment of the right lower lobe. You identify this as aspiration pneumonia which is typically caused by what type of bacteria?
[Bonus: If the X-Ray had shown swelling in the area posterior/deep to the pharyngeal space, there was severe pain while moving the head/neck, and the patient was found to have had an object stuck up deep in his nose, what life-threatening emergency is he at risk for? Who is more at risk for this from an upper respiratory infection?] |